{"id":6028,"date":"2021-03-24T11:19:59","date_gmt":"2021-03-24T11:19:59","guid":{"rendered":"https:\/\/research.reading.ac.uk\/rse\/?page_id=6028"},"modified":"2021-10-07T14:56:31","modified_gmt":"2021-10-07T13:56:31","slug":"unix-basics","status":"publish","type":"page","link":"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/","title":{"rendered":"Unix Basics"},"content":{"rendered":"<div id=\"pl-6028\"  class=\"panel-layout\" ><div id=\"pg-6028-0\"  class=\"panel-grid panel-no-style\" ><div id=\"pgc-6028-0-0\"  class=\"panel-grid-cell\" ><div id=\"panel-6028-0-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"0\" ><div class=\"textwidget\"><h1 style=\"text-align: left\"><span style=\"color: #ffffff\"><span style=\"background-color: #2f7e89;padding-left: 15px;padding-right: 15px\">UNIX Basics<\/span><\/span><\/h1>\n<p>This workshop teaches the foundations of UNIX computing. Lectures and practical tutorials introduce the most common commands and fundamental stepping stones into the world of command line computing. There are many different versions of UNIX, although they share common similarities, so you'll be able to follow this tutorial on all of them, provided that they have a terminal to enter commands and a simple text editor. The most widely used varieties of UNIX are GNU\/LInux, Sun Solaris and MacOS X.<\/p>\n<p>On this page you'll find:<\/p>\n<ol>\n<li>UoR UNIX Basics course videos<\/li>\n<li>UoR Carpentries resources to learn the UNIX shell<\/li>\n<li>Further links and resources to get started on UNIX<\/li>\n<\/ol>\n<p>&nbsp;<\/p>\n<h2><span style=\"text-decoration: underline\">1. UoR UNIX Basics<\/span><\/h2>\n<h3>Main objectives of the course are to be able to:<\/h3>\n<ul>\n<li>use basic commands<\/li>\n<li>navigate the file structure<\/li>\n<li>create directories and files<\/li>\n<li>use a basic text editor<\/li>\n<li>read files and modify them<\/li>\n<li>search for files and file contents<\/li>\n<li>chain commands<\/li>\n<li>write simple bash scripts and execute them<\/li>\n<\/ul>\n<\/div><\/div><\/div><\/div><div id=\"pg-6028-1\"  class=\"panel-grid panel-no-style\" ><div id=\"pgc-6028-1-0\"  class=\"panel-grid-cell\" ><div id=\"panel-6028-1-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"1\" ><div class=\"panel-widget-style panel-widget-style-for-6028-1-0-0\" ><div class=\"textwidget\"><h2><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-5600 alignleft colorbox-6028\" src=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/checklist-300x300.png\" alt=\"\" width=\"98\" height=\"98\" srcset=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/checklist-300x300.png 300w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/checklist-150x150.png 150w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/checklist.png 512w\" sizes=\"auto, (max-width: 98px) 100vw, 98px\" \/><span style=\"color: #2f7e89\">Prerequisites<\/span><\/h2>\n<ol>\n<li style=\"list-style-type: none\">\n<ol>\n<li style=\"list-style-type: none\">\n<ol>\n<li>You need to have access to a UNIX machine. Our tutorial runs on the UoR Linux systems which you can access with your username and password. Do to this, please familiarise yourself first with section 2 of our<a href=\"https:\/\/research.reading.ac.uk\/act\/knowledgebase\/introduction-to-academic-computing\/\"> Introduction to academic computing tutorials<\/a>.<\/li>\n<li>If you are using your own UNIX machine, it should have a text editor installed. In this tutorial we use gedit as it is straightforward and simple to use.<\/li>\n<\/ol>\n<\/li>\n<\/ol>\n<\/li>\n<\/ol>\n<\/div><\/div><\/div><\/div><\/div><div id=\"pg-6028-2\"  class=\"panel-grid panel-no-style\" ><div id=\"pgc-6028-2-0\"  class=\"panel-grid-cell\" ><div id=\"panel-6028-2-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"2\" ><div class=\"textwidget\"><h2><\/h2>\n<table style=\"height: 129px;width: 100.773%;border-collapse: collapse;border-style: hidden\">\n<tbody>\n<tr style=\"background-color: #2f7e89\">\n<td style=\"width: 11.543%;border-style: hidden;height: 25px\">\n<h2 style=\"text-align: center\"><\/h2>\n<\/td>\n<td style=\"width: 133.238%;border-style: hidden;text-align: center;height: 25px\">\n<h2 style=\"text-align: left\"><strong><span style=\"color: #ffffff\">Course Content<\/span><\/strong><\/h2>\n<\/td>\n<\/tr>\n<tr style=\"height: 30px\">\n<td style=\"width: 11.543%;height: 30px;border-style: hidden\"><a href=\"https:\/\/web.microsoftstream.com\/video\/a7212144-ba13-41e6-b888-cfc2220488dd\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-5598 aligncenter colorbox-6028\" style=\"letter-spacing: 0.08px\" src=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-300x300.png\" alt=\"\" width=\"54\" height=\"54\" srcset=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-300x300.png 300w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-150x150.png 150w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse.png 512w\" sizes=\"auto, (max-width: 54px) 100vw, 54px\" \/><\/a><\/td>\n<td style=\"width: 133.238%;height: 30px;border-style: hidden\">\n<h3>1. Introduction to UNIX and basic commands<\/h3>\n<p>This section introduces you to the concept of command line computing. It covers the fundamentals of UNIX, the directory structure and basic commands to navigate the system.<\/td>\n<\/tr>\n<tr style=\"height: 25px;background-color: #dbdbdb\">\n<td style=\"width: 11.543%;height: 25px;border-style: hidden\"><a href=\"https:\/\/web.microsoftstream.com\/video\/050d188f-ea42-44e6-89ae-2fa6d3d25833\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-5598 aligncenter colorbox-6028\" style=\"letter-spacing: 0.08px\" src=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-300x300.png\" alt=\"\" width=\"54\" height=\"54\" srcset=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-300x300.png 300w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-150x150.png 150w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse.png 512w\" sizes=\"auto, (max-width: 54px) 100vw, 54px\" \/><\/a><\/td>\n<td style=\"width: 133.238%;height: 25px;border-style: hidden\">\n<h3>2. Creating and manipulating files<\/h3>\n<p>In this section you'll learn how to create and edit files using a simple text editor, read files from the command line and commands to copy, move and remove files as well as command options. We also cover displaying text arguments to the screen and appending text to files.<\/td>\n<\/tr>\n<tr style=\"height: 24px\">\n<td style=\"width: 11.543%;height: 24px;border-style: hidden\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-5598 aligncenter colorbox-6028\" style=\"letter-spacing: 0.08px\" src=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-300x300.png\" alt=\"\" width=\"54\" height=\"54\" srcset=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-300x300.png 300w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-150x150.png 150w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse.png 512w\" sizes=\"auto, (max-width: 54px) 100vw, 54px\" \/><\/td>\n<td style=\"width: 133.238%;height: 24px;border-style: hidden\">\n<h3 style=\"letter-spacing: 0.08px\">COMING SOON! 3. Chaining commands and creating an alias<\/h3>\n<\/td>\n<\/tr>\n<tr style=\"background-color: #dbdbdb\">\n<td style=\"width: 11.543%;border-style: hidden;height: 25px\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-5598 aligncenter colorbox-6028\" style=\"letter-spacing: 0.08px\" src=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-300x300.png\" alt=\"\" width=\"54\" height=\"54\" srcset=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-300x300.png 300w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse-150x150.png 150w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/play_rse.png 512w\" sizes=\"auto, (max-width: 54px) 100vw, 54px\" \/><\/td>\n<td style=\"width: 133.238%;border-style: hidden;height: 25px\">\n<h3>COMING SOON! 4. Simple bash scripting<\/h3>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>&nbsp;<\/p>\n<\/div><\/div><\/div><\/div><div id=\"pg-6028-3\"  class=\"panel-grid panel-no-style\" ><div id=\"pgc-6028-3-0\"  class=\"panel-grid-cell\" ><div id=\"panel-6028-3-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"3\" ><div class=\"textwidget\"><h2><span style=\"text-decoration: underline\">2. UoR Carpentries<\/span><\/h2>\n<p><a href=\"https:\/\/software-carpentry.org\/\">Software Carpentry<\/a> aims to help researchers get their work done in less time and with less pain by teaching them basic research computing skills. At UoR, we run hands-on software workshops, which cover basic concepts and tools, including program design, version control, data management, and task automation. The workshop resources for the UNIX Shell are accessible in the links below. We will also create a series of video tutorials which will be accessible outside of the workshops.<\/p>\n<h3>Main objectives of the course are to be able to:<\/h3>\n<ul>\n<li>understand the command shell<\/li>\n<li>learn core commands to navigate and manipulate files and directories<\/li>\n<li>combine commands to do new things<\/li>\n<li>construct loops for repetitive tasks<\/li>\n<li>write shell scripts to save and re-use commands<\/li>\n<li>find files and things in files<\/li>\n<\/ul>\n<table style=\"height: 130px;width: 24.8927%;border: 5px solid #2f7e89\">\n<tbody>\n<tr>\n<td style=\"width: 100%;border-style: solid;border-color: #2f7e89\"><a href=\"https:\/\/swcarpentry.github.io\/shell-novice\/\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-6625 alignleft colorbox-6028\" style=\"letter-spacing: 0.08px\" src=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/10\/Software_Carpentries_logo-260x300.png\" alt=\"\" width=\"84\" height=\"97\" srcset=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/10\/Software_Carpentries_logo-260x300.png 260w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/10\/Software_Carpentries_logo-768x886.png 768w, https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/10\/Software_Carpentries_logo.png 780w\" sizes=\"auto, (max-width: 84px) 100vw, 84px\" \/><\/a><\/p>\n<p><a href=\"https:\/\/swcarpentry.github.io\/shell-novice\/\">The UNIX Shell online resources<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div><\/div><\/div><\/div><div id=\"pg-6028-4\"  class=\"panel-grid panel-no-style\" ><div id=\"pgc-6028-4-0\"  class=\"panel-grid-cell\" ><div id=\"panel-6028-4-0-0\" class=\"so-panel widget widget_black-studio-tinymce widget_black_studio_tinymce panel-first-child panel-last-child\" data-index=\"4\" ><div class=\"textwidget\"><h2><span style=\"text-decoration: underline\">3. Further UNIX resources<\/span><\/h2>\n<ol>\n<li><a href=\"https:\/\/www.linkedin.com\/checkpoint\/enterprise\/login\/83824434?pathWildcard=83824434&amp;application=learning&amp;redirect=https%3A%2F%2Fwww%2Elinkedin%2Ecom%2Flearning%2Fpaths%2Funiversity-of-reading-unix-linux-fundamentals%3Fu%3D83824434\">Linkedin learning: Unix\/Linux fundamentals learning path\u00a0<\/a><\/li>\n<li><a href=\"https:\/\/www.guru99.com\/linux-commands-cheat-sheet.html\">Linux Command Cheat Sheet by Guru99<\/a><\/li>\n<li><a href=\"https:\/\/ubuntu.com\/tutorials\/command-line-for-beginners#1-overview\">Command Line for Beginners by Ubuntu Tutorials<\/a><\/li>\n<\/ol>\n<p>&nbsp;<\/p>\n<\/div><\/div><\/div><\/div><\/div>","protected":false},"excerpt":{"rendered":"<p>UNIX Basics This workshop teaches the foundations of UNIX computing. Lectures and practical tutorials introduce the most common commands and fundamental stepping stones into the world of command line computing&#8230;.<a class=\"read-more\" href=\"&#104;&#116;&#116;&#112;&#115;&#58;&#47;&#47;&#114;&#101;&#115;&#101;&#97;&#114;&#99;&#104;&#46;&#114;&#101;&#97;&#100;&#105;&#110;&#103;&#46;&#97;&#99;&#46;&#117;&#107;&#47;&#114;&#115;&#101;&#47;&#117;&#110;&#105;&#120;&#45;&#98;&#97;&#115;&#105;&#99;&#115;&#47;\">Read More ><\/a><\/p>\n","protected":false},"author":421,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"__cvm_playback_settings":[],"__cvm_video_id":"","footnotes":"","_links_to":"","_links_to_target":""},"class_list":["post-6028","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v21.8.1 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Unix Basics - Research Software Engineering at UOR<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/\" \/>\n<meta property=\"og:locale\" content=\"en_GB\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Unix Basics - Research Software Engineering at UOR\" \/>\n<meta property=\"og:description\" content=\"UNIX Basics This workshop teaches the foundations of UNIX computing. Lectures and practical tutorials introduce the most common commands and fundamental stepping stones into the world of command line computing....Read More &gt;\" \/>\n<meta property=\"og:url\" content=\"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/\" \/>\n<meta property=\"og:site_name\" content=\"Research Software Engineering at UOR\" \/>\n<meta property=\"article:modified_time\" content=\"2021-10-07T13:56:31+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2021\/01\/checklist-300x300.png\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Estimated reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"4 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/\",\"url\":\"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/\",\"name\":\"Unix Basics - Research Software Engineering at UOR\",\"isPartOf\":{\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/#website\"},\"datePublished\":\"2021-03-24T11:19:59+00:00\",\"dateModified\":\"2021-10-07T13:56:31+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/#breadcrumb\"},\"inLanguage\":\"en-GB\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\/\/research.reading.ac.uk\/rse\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Unix Basics\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/#website\",\"url\":\"https:\/\/research.reading.ac.uk\/rse\/\",\"name\":\"Academic Computing Team\",\"description\":\"\",\"publisher\":{\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/#organization\"},\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/research.reading.ac.uk\/rse\/?s={search_term_string}\"},\"query-input\":\"required name=search_term_string\"}],\"inLanguage\":\"en-GB\"},{\"@type\":\"Organization\",\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/#organization\",\"name\":\"University of Reading\",\"url\":\"https:\/\/research.reading.ac.uk\/rse\/\",\"logo\":{\"@type\":\"ImageObject\",\"inLanguage\":\"en-GB\",\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/#\/schema\/logo\/image\/\",\"url\":\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2017\/08\/cropped-University_of_Reading_shield-1.png\",\"contentUrl\":\"https:\/\/research.reading.ac.uk\/rse\/wp-content\/uploads\/sites\/146\/2017\/08\/cropped-University_of_Reading_shield-1.png\",\"width\":512,\"height\":512,\"caption\":\"University of Reading\"},\"image\":{\"@id\":\"https:\/\/research.reading.ac.uk\/rse\/#\/schema\/logo\/image\/\"}}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Unix Basics - Research Software Engineering at UOR","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/research.reading.ac.uk\/rse\/unix-basics\/","og_locale":"en_GB","og_type":"article","og_title":"Unix Basics - Research Software Engineering at UOR","og_description":"UNIX Basics This workshop teaches the foundations of UNIX computing. 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